Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Gm27701-201ENSMUST00000184498 110 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Gm28911-201ENSMUST00000188837 117 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Gm8515-201ENSMUST00000194852 576 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Gm6180-201ENSMUST00000065243 498 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav5d-4Q5R1F6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Gm9908-201ENSMUST00000211534 448 ntBASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Gm18473-201ENSMUST00000220543 868 ntBASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Gm16372-201ENSMUST00000073088 450 ntBASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5d-4Q5R1F6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Trav5d-4Q5R1F6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5d-4Q5R1F6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.15□□□□□ -0.63
Trav5d-4Q5R1F6 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Gm44069-201ENSMUST00000204898 506 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Gm8463-201ENSMUST00000208573 613 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Gm6458-201ENSMUST00000211573 635 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav5d-4Q5R1F6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms