Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Gm25545-201ENSMUST00000122673 323 ntBASIC22.46■■□□□ 1.19
Trim41Q5NCC3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC22.46■■□□□ 1.19
Trim41Q5NCC3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 AC125486.1-201ENSMUST00000218701 320 ntBASIC22.46■■□□□ 1.19
Trim41Q5NCC3 AC159103.1-201ENSMUST00000228325 429 ntBASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Gm4366-201ENSMUST00000201488 1342 ntBASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Trim41Q5NCC3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim41Q5NCC3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim41Q5NCC3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim41Q5NCC3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Gm26956-201ENSMUST00000182176 986 ntBASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Gm9004-201ENSMUST00000218739 1222 ntBASIC22.45■■□□□ 1.18
Trim41Q5NCC3 AC154276.3-201ENSMUST00000227643 998 ntBASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim41Q5NCC3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Gm6580-201ENSMUST00000117504 1357 ntBASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Gm7666-201ENSMUST00000146631 819 ntBASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Gm19166-201ENSMUST00000196041 1063 ntBASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Gm5950-201ENSMUST00000213337 772 ntBASIC22.44■■□□□ 1.18
Trim41Q5NCC3 AC159376.1-201ENSMUST00000218504 630 ntBASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim41Q5NCC3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Gm12291-201ENSMUST00000121627 311 ntBASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Gm23363-201ENSMUST00000175024 79 ntBASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Spcs1-203ENSMUST00000226374 592 ntBASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Daam2-202ENSMUST00000224595 1926 ntBASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim41Q5NCC3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms