Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vps13aQ5H8C4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm17831-201ENSMUST00000205579 900 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm45594-201ENSMUST00000211717 241 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm4654-201ENSMUST00000183305 982 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm807-202ENSMUST00000224929 408 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm14219-201ENSMUST00000120414 288 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps13aQ5H8C4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gm12196-201ENSMUST00000120954 262 ntBASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gm5100-201ENSMUST00000195631 589 ntBASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Gm12783-201ENSMUST00000121425 397 ntBASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps13aQ5H8C4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm12516-201ENSMUST00000120819 385 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Gm23363-201ENSMUST00000175024 79 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps13aQ5H8C4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms