Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Gm37259-201ENSMUST00000193903 849 ntBASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Gm22323-201ENSMUST00000103832 109 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Gm44364-201ENSMUST00000198368 141 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Gm8099-201ENSMUST00000200510 742 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Morn2-202ENSMUST00000227729 656 ntBASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rc3h1Q4VGL6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gm12291-201ENSMUST00000121627 311 ntBASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gm38241-201ENSMUST00000192641 898 ntBASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rc3h1Q4VGL6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms