Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm5687-201ENSMUST00000118252 640 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm27486-201ENSMUST00000184923 80 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syne3Q4FZC9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.77□□□□□ -0.2
Syne3Q4FZC9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Syne3Q4FZC9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Syne3Q4FZC9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Syne3Q4FZC9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm13612-201ENSMUST00000119276 390 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Syne3Q4FZC9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Syne3Q4FZC9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.76□□□□□ -0.21
Syne3Q4FZC9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Syne3Q4FZC9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms