Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cnga4Q3UW12 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cnga4Q3UW12 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cnga4Q3UW12 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cnga4Q3UW12 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm25144-201ENSMUST00000179561 110 ntBASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm25352-201ENSMUST00000179815 110 ntBASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Gm38144-201ENSMUST00000192790 465 ntBASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cnga4Q3UW12 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Gm5264-201ENSMUST00000190584 848 ntBASIC13.15□□□□□ -0.3
Cnga4Q3UW12 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Gm5161-201ENSMUST00000075243 853 ntBASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cnga4Q3UW12 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cnga4Q3UW12 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cnga4Q3UW12 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cnga4Q3UW12 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cnga4Q3UW12 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cnga4Q3UW12 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cnga4Q3UW12 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cnga4Q3UW12 Gm43703-201ENSMUST00000200523 763 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms