Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Mir874-201ENSMUST00000104769 76 ntBASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Mir5120-201ENSMUST00000175020 78 ntBASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm45925-201ENSMUST00000218882 744 ntBASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gm8712-201ENSMUST00000221090 701 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3aQ3ULJ3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm7857-201ENSMUST00000117957 358 ntBASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm14277-201ENSMUST00000121195 360 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms