Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11□□□□□ -0.65
Sdk1Q3UH53 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Gm37201-201ENSMUST00000191845 523 ntBASIC11□□□□□ -0.65
Sdk1Q3UH53 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sdk1Q3UH53 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sdk1Q3UH53 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm13045-201ENSMUST00000119019 712 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Gm38210-201ENSMUST00000191944 809 ntBASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sdk1Q3UH53 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sdk1Q3UH53 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms