Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm7783-201ENSMUST00000204795 781 ntBASIC11.27□□□□□ -0.61
Q3U1D9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.27□□□□□ -0.61
Q3U1D9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.27□□□□□ -0.61
Q3U1D9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Gm7046-201ENSMUST00000221351 977 ntBASIC11.27□□□□□ -0.61
Q3U1D9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Q3U1D9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Q3U1D9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.27□□□□□ -0.61
Q3U1D9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Q3U1D9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.27□□□□□ -0.61
Q3U1D9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Q3U1D9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.26□□□□□ -0.61
Q3U1D9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.26□□□□□ -0.61
Q3U1D9 Gm15370-201ENSMUST00000117158 253 ntBASIC11.26□□□□□ -0.61
Q3U1D9 Gm14704-201ENSMUST00000120300 874 ntBASIC11.26□□□□□ -0.61
Q3U1D9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.26□□□□□ -0.61
Q3U1D9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Gm8738-201ENSMUST00000172606 329 ntBASIC11.26□□□□□ -0.61
Q3U1D9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.26□□□□□ -0.61
Q3U1D9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.26□□□□□ -0.61
Q3U1D9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.26□□□□□ -0.61
Q3U1D9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Q3U1D9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.26□□□□□ -0.61
Q3U1D9 Gm5904-201ENSMUST00000210286 865 ntBASIC11.26□□□□□ -0.61
Q3U1D9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Gm9257-201ENSMUST00000221254 232 ntBASIC11.26□□□□□ -0.61
Q3U1D9 Cts7-204ENSMUST00000225321 1257 ntBASIC11.26□□□□□ -0.61
Q3U1D9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Q3U1D9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Q3U1D9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Q3U1D9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Q3U1D9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Q3U1D9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.26□□□□□ -0.61
Q3U1D9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Q3U1D9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Q3U1D9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Q3U1D9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Q3U1D9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Q3U1D9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Q3U1D9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.25□□□□□ -0.61
Q3U1D9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.25□□□□□ -0.61
Q3U1D9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.25□□□□□ -0.61
Q3U1D9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Gm12502-201ENSMUST00000120197 444 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms