Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm27772-201ENSMUST00000184900 187 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm17795-201ENSMUST00000214505 757 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm9797-201ENSMUST00000052902 613 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fndc4Q3TR08 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm22189-201ENSMUST00000103822 86 ntBASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.07□□□□□ -0.64
Fndc4Q3TR08 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fndc4Q3TR08 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Mir6977-201ENSMUST00000184960 64 ntBASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.06□□□□□ -0.64
Fndc4Q3TR08 Gm7730-201ENSMUST00000212486 454 ntBASIC11.06□□□□□ -0.64
Fndc4Q3TR08 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms