Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43aQ3TL54 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm16215-201ENSMUST00000161990 637 ntBASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm43094-201ENSMUST00000196549 921 ntBASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm20445-201ENSMUST00000061905 565 ntBASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.76□□□□□ -0.21
Trim43aQ3TL54 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43aQ3TL54 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Gm15321-201ENSMUST00000121290 288 ntBASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms