Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trappc13Q3TIR1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trappc13Q3TIR1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trappc13Q3TIR1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Gm12859-201ENSMUST00000117834 427 ntBASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Mir6977-201ENSMUST00000184960 64 ntBASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.09□□□□□ -0.47
Trappc13Q3TIR1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trappc13Q3TIR1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trappc13Q3TIR1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.08□□□□□ -0.47
Trappc13Q3TIR1 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.08□□□□□ -0.47
Trappc13Q3TIR1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm14350-201ENSMUST00000116642 640 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm7488-201ENSMUST00000117148 684 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm16202-201ENSMUST00000117532 544 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Gm27437-201ENSMUST00000183429 107 ntBASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trappc13Q3TIR1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Gm16372-201ENSMUST00000073088 450 ntBASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trappc13Q3TIR1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms