Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hddc2Q3SXD3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hddc2Q3SXD3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.02□□□□□ -0.48
Hddc2Q3SXD3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hddc2Q3SXD3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hddc2Q3SXD3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hddc2Q3SXD3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hddc2Q3SXD3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm17968-201ENSMUST00000194902 784 ntBASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hddc2Q3SXD3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12□□□□□ -0.49
Hddc2Q3SXD3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Gm43984-201ENSMUST00000204572 2864 ntBASIC12□□□□□ -0.49
Hddc2Q3SXD3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Gm9727-201ENSMUST00000161387 555 ntBASIC12□□□□□ -0.49
Hddc2Q3SXD3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12□□□□□ -0.49
Hddc2Q3SXD3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms