Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccbe1Q3MI99 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Gm45841-201ENSMUST00000207700 164 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Chchd1-203ENSMUST00000224633 557 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.74□□□□□ -0.53
Ccbe1Q3MI99 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Gm14701-201ENSMUST00000117156 348 ntBASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Gm18027-201ENSMUST00000218947 619 ntBASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccbe1Q3MI99 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccbe1Q3MI99 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms