Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trim63Q38HM4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm37055-201ENSMUST00000191866 133 ntBASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.62□□□□□ -0.71
Trim63Q38HM4 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trim63Q38HM4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm18489-201ENSMUST00000172565 551 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm6623-201ENSMUST00000173570 544 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm7889-201ENSMUST00000185591 958 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.61□□□□□ -0.71
Trim63Q38HM4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trim63Q38HM4 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms