Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trpm1Q2TV84 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trpm1Q2TV84 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trpm1Q2TV84 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Trpm1Q2TV84 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trpm1Q2TV84 Gm8731-201ENSMUST00000118088 412 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm4726-201ENSMUST00000135604 736 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm6019-201ENSMUST00000148369 736 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm24891-201ENSMUST00000104391 136 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm43186-201ENSMUST00000198130 824 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm42629-201ENSMUST00000199063 1102 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm44158-201ENSMUST00000203881 505 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gm7395-201ENSMUST00000216059 1045 ntBASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpm1Q2TV84 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Gm8325-201ENSMUST00000099086 453 ntBASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpm1Q2TV84 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.93■□□□□ 0.46
Trpm1Q2TV84 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Gm15352-201ENSMUST00000118696 270 ntBASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Gm13668-201ENSMUST00000119237 1001 ntBASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Gm12164-201ENSMUST00000121695 551 ntBASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpm1Q2TV84 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms