Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm29608-201ENSMUST00000190444 463 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm5425-201ENSMUST00000214125 459 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.81□□□□□ -0.68
Tff1Q08423 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tff1Q08423 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tff1Q08423 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Tff1Q08423 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tff1Q08423 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tff1Q08423 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tff1Q08423 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tff1Q08423 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.8□□□□□ -0.68
Tff1Q08423 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tff1Q08423 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Tff1Q08423 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.8□□□□□ -0.68
Tff1Q08423 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.8□□□□□ -0.68
Tff1Q08423 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.8□□□□□ -0.68
Tff1Q08423 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.8□□□□□ -0.68
Tff1Q08423 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.8□□□□□ -0.68
Tff1Q08423 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tff1Q08423 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tff1Q08423 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tff1Q08423 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tff1Q08423 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.79□□□□□ -0.68
Tff1Q08423 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.79□□□□□ -0.68
Tff1Q08423 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.79□□□□□ -0.68
Tff1Q08423 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.79□□□□□ -0.68
Tff1Q08423 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.79□□□□□ -0.68
Tff1Q08423 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tff1Q08423 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.79□□□□□ -0.68
Tff1Q08423 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tff1Q08423 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.79□□□□□ -0.68
Tff1Q08423 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.79□□□□□ -0.68
Tff1Q08423 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tff1Q08423 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms