Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf1Q07802 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.17□□□□□ -0.3
Ebf1Q07802 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm17376-201ENSMUST00000166016 84 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Mir5132-201ENSMUST00000175166 71 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.16□□□□□ -0.3
Ebf1Q07802 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm4768-201ENSMUST00000206199 686 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm6082-201ENSMUST00000215204 454 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.16□□□□□ -0.3
Ebf1Q07802 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf1Q07802 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ebf1Q07802 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm11222-201ENSMUST00000119005 738 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm24548-201ENSMUST00000158650 108 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm3890-201ENSMUST00000182416 207 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm19163-201ENSMUST00000223313 780 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms