Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col17a1Q07563 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm24078-201ENSMUST00000158184 103 ntBASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm17192-201ENSMUST00000169031 511 ntBASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm28686-201ENSMUST00000187404 609 ntBASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm45758-201ENSMUST00000212448 1006 ntBASIC19.45■□□□□ 0.7
Col17a1Q07563 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col17a1Q07563 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC19.45■□□□□ 0.7
Col17a1Q07563 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col17a1Q07563 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col17a1Q07563 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col17a1Q07563 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Col17a1Q07563 Gm13117-201ENSMUST00000120894 691 ntBASIC19.44■□□□□ 0.7
Col17a1Q07563 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Gm43997-201ENSMUST00000203986 1005 ntBASIC19.44■□□□□ 0.7
Col17a1Q07563 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC19.44■□□□□ 0.7
Col17a1Q07563 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC19.44■□□□□ 0.7
Col17a1Q07563 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Col17a1Q07563 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col17a1Q07563 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col17a1Q07563 Gm43273-201ENSMUST00000199649 2594 ntBASIC19.44■□□□□ 0.7
Col17a1Q07563 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.44■□□□□ 0.7
Col17a1Q07563 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.44■□□□□ 0.7
Col17a1Q07563 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm18210-201ENSMUST00000209001 1524 ntBASIC19.43■□□□□ 0.7
Col17a1Q07563 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm15620-201ENSMUST00000122949 270 ntBASIC19.43■□□□□ 0.7
Col17a1Q07563 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm26875-201ENSMUST00000181006 950 ntBASIC19.43■□□□□ 0.7
Col17a1Q07563 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Col17a1Q07563 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 AC187103.3-201ENSMUST00000225725 646 ntBASIC19.43■□□□□ 0.7
Col17a1Q07563 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC19.43■□□□□ 0.7
Col17a1Q07563 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col17a1Q07563 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Gm22388-201ENSMUST00000158194 248 ntBASIC19.42■□□□□ 0.7
Col17a1Q07563 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Gm26982-201ENSMUST00000182250 1151 ntBASIC19.42■□□□□ 0.7
Col17a1Q07563 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC19.42■□□□□ 0.7
Col17a1Q07563 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.42■□□□□ 0.7
Col17a1Q07563 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col17a1Q07563 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC19.42■□□□□ 0.7
Col17a1Q07563 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col17a1Q07563 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col17a1Q07563 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms