Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox4Q06831 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox4Q06831 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.77□□□□□ -0.37
Sox4Q06831 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.77□□□□□ -0.37
Sox4Q06831 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sox4Q06831 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Sox4Q06831 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox4Q06831 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sox4Q06831 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox4Q06831 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Gm12742-201ENSMUST00000117326 410 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox4Q06831 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Gm5370-201ENSMUST00000187187 574 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Gm37424-201ENSMUST00000191727 561 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sox4Q06831 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox4Q06831 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.76□□□□□ -0.37
Sox4Q06831 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox4Q06831 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox4Q06831 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Gm8062-201ENSMUST00000139696 444 ntBASIC12.75□□□□□ -0.37
Sox4Q06831 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox4Q06831 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Gm27514-201ENSMUST00000183692 110 ntBASIC12.75□□□□□ -0.37
Sox4Q06831 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.75□□□□□ -0.37
Sox4Q06831 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Gm4768-201ENSMUST00000206199 686 ntBASIC12.75□□□□□ -0.37
Sox4Q06831 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.75□□□□□ -0.37
Sox4Q06831 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.75□□□□□ -0.37
Sox4Q06831 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox4Q06831 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox4Q06831 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox4Q06831 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms