Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.61□□□□□ -0.39
Atf4Q06507 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.61□□□□□ -0.39
Atf4Q06507 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Gm38241-201ENSMUST00000192641 898 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 Gm18692-201ENSMUST00000193047 511 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 Gm38671-201ENSMUST00000200573 130 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 Gm3961-201ENSMUST00000204425 994 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Atf4Q06507 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atf4Q06507 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atf4Q06507 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.61□□□□□ -0.39
Atf4Q06507 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atf4Q06507 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.61□□□□□ -0.39
Atf4Q06507 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atf4Q06507 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Atf4Q06507 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atf4Q06507 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.6□□□□□ -0.39
Atf4Q06507 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Gm9499-201ENSMUST00000180888 964 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.6□□□□□ -0.39
Atf4Q06507 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.6□□□□□ -0.39
Atf4Q06507 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 CT025538.2-201ENSMUST00000226083 772 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atf4Q06507 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.6□□□□□ -0.39
Atf4Q06507 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atf4Q06507 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf4Q06507 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf4Q06507 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms