Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.98□□□□□ -0.49
Col10a1Q05306 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.98□□□□□ -0.49
Col10a1Q05306 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Gm10146-201ENSMUST00000072739 309 ntBASIC11.98□□□□□ -0.49
Col10a1Q05306 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.98□□□□□ -0.49
Col10a1Q05306 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col10a1Q05306 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm4271-201ENSMUST00000174444 973 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm29127-201ENSMUST00000188304 517 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm43433-201ENSMUST00000196573 481 ntBASIC11.97□□□□□ -0.49
Col10a1Q05306 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.97□□□□□ -0.49
Col10a1Q05306 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col10a1Q05306 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms