Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Msx2Q03358 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Msx2Q03358 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Msx2Q03358 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.58□□□□□ -0.4
Msx2Q03358 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.58□□□□□ -0.4
Msx2Q03358 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Msx2Q03358 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.58□□□□□ -0.4
Msx2Q03358 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.58□□□□□ -0.4
Msx2Q03358 Gm5425-201ENSMUST00000214125 459 ntBASIC12.58□□□□□ -0.4
Msx2Q03358 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.58□□□□□ -0.4
Msx2Q03358 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.58□□□□□ -0.4
Msx2Q03358 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.58□□□□□ -0.4
Msx2Q03358 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.58□□□□□ -0.4
Msx2Q03358 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Msx2Q03358 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Msx2Q03358 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Msx2Q03358 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Msx2Q03358 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.58□□□□□ -0.4
Msx2Q03358 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx2Q03358 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Msx2Q03358 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Msx2Q03358 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Msx2Q03358 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msx2Q03358 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.57□□□□□ -0.4
Msx2Q03358 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.57□□□□□ -0.4
Msx2Q03358 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.57□□□□□ -0.4
Msx2Q03358 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.57□□□□□ -0.4
Msx2Q03358 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Msx2Q03358 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msx2Q03358 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.57□□□□□ -0.4
Msx2Q03358 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Msx2Q03358 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msx2Q03358 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.56□□□□□ -0.4
Msx2Q03358 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Msx2Q03358 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.56□□□□□ -0.4
Msx2Q03358 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm14822-201ENSMUST00000122247 291 ntBASIC12.56□□□□□ -0.4
Msx2Q03358 Gm11594-201ENSMUST00000122313 162 ntBASIC12.56□□□□□ -0.4
Msx2Q03358 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms