Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm25880-201ENSMUST00000104331 132 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm42779-201ENSMUST00000198807 406 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm13408-201ENSMUST00000119822 798 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm13935-201ENSMUST00000121859 798 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.97□□□□□ -0.49
Cacna1aP97445 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.97□□□□□ -0.49
Cacna1aP97445 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.97□□□□□ -0.49
Cacna1aP97445 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.97□□□□□ -0.49
Cacna1aP97445 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.97□□□□□ -0.49
Cacna1aP97445 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cacna1aP97445 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cacna1aP97445 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.96□□□□□ -0.49
Cacna1aP97445 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cacna1aP97445 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cacna1aP97445 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.96□□□□□ -0.5
Cacna1aP97445 Gm38210-201ENSMUST00000191944 809 ntBASIC11.96□□□□□ -0.5
Cacna1aP97445 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.96□□□□□ -0.5
Cacna1aP97445 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms