Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-1P97436 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-1P97436 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-1P97436 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-1P97436 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Nkx3-1P97436 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.2□□□□□ -0.62
Nkx3-1P97436 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.2□□□□□ -0.62
Nkx3-1P97436 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.2□□□□□ -0.62
Nkx3-1P97436 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.2□□□□□ -0.62
Nkx3-1P97436 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-1P97436 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.19□□□□□ -0.62
Nkx3-1P97436 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Gm14726-201ENSMUST00000120623 896 ntBASIC11.19□□□□□ -0.62
Nkx3-1P97436 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Gm26956-201ENSMUST00000182176 986 ntBASIC11.19□□□□□ -0.62
Nkx3-1P97436 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.19□□□□□ -0.62
Nkx3-1P97436 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.19□□□□□ -0.62
Nkx3-1P97436 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.19□□□□□ -0.62
Nkx3-1P97436 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx3-1P97436 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms