Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim43cP86449 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43cP86449 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43cP86449 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43cP86449 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim43cP86449 Gm27682-201ENSMUST00000183930 110 ntBASIC14.1□□□□□ -0.15
Trim43cP86449 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.1□□□□□ -0.15
Trim43cP86449 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43cP86449 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43cP86449 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.1□□□□□ -0.15
Trim43cP86449 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim43cP86449 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43cP86449 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.09□□□□□ -0.15
Trim43cP86449 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim43cP86449 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim43cP86449 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim43cP86449 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim43cP86449 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim43cP86449 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.09□□□□□ -0.15
Trim43cP86449 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.09□□□□□ -0.15
Trim43cP86449 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim43cP86449 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim43cP86449 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim43cP86449 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim43cP86449 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43cP86449 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43cP86449 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43cP86449 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43cP86449 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trim43cP86449 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43cP86449 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.08□□□□□ -0.16
Trim43cP86449 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim43cP86449 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim43cP86449 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Gm5745-201ENSMUST00000183748 313 ntBASIC14.08□□□□□ -0.16
Trim43cP86449 Gm8602-201ENSMUST00000184045 607 ntBASIC14.08□□□□□ -0.16
Trim43cP86449 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms