Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
Trim43bP86448 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim43bP86448 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim43bP86448 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43bP86448 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43bP86448 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim43bP86448 Gm15770-201ENSMUST00000117498 584 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 Gm28911-201ENSMUST00000188837 117 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 Gm43433-201ENSMUST00000196573 481 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.36□□□□□ -0.27
Trim43bP86448 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim43bP86448 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim43bP86448 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43bP86448 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43bP86448 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim43bP86448 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43bP86448 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim43bP86448 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim43bP86448 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.35□□□□□ -0.27
Trim43bP86448 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim43bP86448 Gm17794-201ENSMUST00000220252 955 ntBASIC13.35□□□□□ -0.27
Trim43bP86448 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim43bP86448 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43bP86448 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.35□□□□□ -0.27
Trim43bP86448 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43bP86448 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim43bP86448 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms