Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcbP82349 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcbP82349 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.59□□□□□ -0.55
SgcbP82349 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.59□□□□□ -0.55
SgcbP82349 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.59□□□□□ -0.55
SgcbP82349 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gm13226-201ENSMUST00000117838 404 ntBASIC11.59□□□□□ -0.55
SgcbP82349 Gm16177-201ENSMUST00000120728 718 ntBASIC11.59□□□□□ -0.55
SgcbP82349 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.59□□□□□ -0.55
SgcbP82349 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gm28693-202ENSMUST00000190758 331 ntBASIC11.59□□□□□ -0.55
SgcbP82349 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.59□□□□□ -0.55
SgcbP82349 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SgcbP82349 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.59□□□□□ -0.55
SgcbP82349 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.59□□□□□ -0.55
SgcbP82349 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.59□□□□□ -0.55
SgcbP82349 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SgcbP82349 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.59□□□□□ -0.55
SgcbP82349 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.59□□□□□ -0.55
SgcbP82349 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.59□□□□□ -0.55
SgcbP82349 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcbP82349 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SgcbP82349 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SgcbP82349 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Gm45251-201ENSMUST00000209486 1465 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SgcbP82349 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SgcbP82349 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SgcbP82349 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.58□□□□□ -0.56
SgcbP82349 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.58□□□□□ -0.56
SgcbP82349 Gm1335-201ENSMUST00000121653 386 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.58□□□□□ -0.56
SgcbP82349 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.58□□□□□ -0.56
SgcbP82349 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SgcbP82349 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Gm10268-201ENSMUST00000085340 555 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.58□□□□□ -0.56
SgcbP82349 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.58□□□□□ -0.56
SgcbP82349 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
SgcbP82349 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SgcbP82349 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SgcbP82349 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SgcbP82349 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
SgcbP82349 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
SgcbP82349 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcbP82349 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SgcbP82349 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcbP82349 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms