Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcgP82348 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcgP82348 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SgcgP82348 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcgP82348 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.79□□□□□ -0.36
SgcgP82348 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.79□□□□□ -0.36
SgcgP82348 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SgcgP82348 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Cts7-204ENSMUST00000225321 1257 ntBASIC12.79□□□□□ -0.36
SgcgP82348 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.79□□□□□ -0.36
SgcgP82348 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.79□□□□□ -0.36
SgcgP82348 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcgP82348 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SgcgP82348 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.79□□□□□ -0.36
SgcgP82348 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SgcgP82348 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SgcgP82348 Snord83b-201ENSMUST00000104546 94 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Gm15370-201ENSMUST00000117158 253 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcgP82348 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.78□□□□□ -0.36
SgcgP82348 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcgP82348 Gm8738-201ENSMUST00000172606 329 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcgP82348 Gm18584-201ENSMUST00000203098 964 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcgP82348 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SgcgP82348 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Gm9368-201ENSMUST00000219348 831 ntBASIC12.78□□□□□ -0.36
SgcgP82348 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.78□□□□□ -0.36
SgcgP82348 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.78□□□□□ -0.36
SgcgP82348 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
SgcgP82348 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SgcgP82348 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.78□□□□□ -0.36
SgcgP82348 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SgcgP82348 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SgcgP82348 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcgP82348 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SgcgP82348 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
SgcgP82348 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcgP82348 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcgP82348 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcgP82348 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcgP82348 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcgP82348 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcgP82348 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.77□□□□□ -0.37
SgcgP82348 Gm14704-201ENSMUST00000120300 874 ntBASIC12.77□□□□□ -0.37
SgcgP82348 Gm13342-201ENSMUST00000121055 207 ntBASIC12.77□□□□□ -0.37
SgcgP82348 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms