Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm8805-201ENSMUST00000117848 313 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm11803-201ENSMUST00000119966 444 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Gm8810-201ENSMUST00000172895 754 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Gm16372-201ENSMUST00000073088 450 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Gm5356-201ENSMUST00000093326 615 ntBASIC12.92□□□□□ -0.34
Ldb1P70662 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ldb1P70662 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.91□□□□□ -0.34
Ldb1P70662 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Ldb1P70662 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb1P70662 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Ldb1P70662 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ldb1P70662 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.91□□□□□ -0.34
Ldb1P70662 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ldb1P70662 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb1P70662 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.91□□□□□ -0.34
Ldb1P70662 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.91□□□□□ -0.34
Ldb1P70662 Gm7653-201ENSMUST00000214567 508 ntBASIC12.91□□□□□ -0.34
Ldb1P70662 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.91□□□□□ -0.34
Ldb1P70662 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ldb1P70662 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb1P70662 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.91□□□□□ -0.34
Ldb1P70662 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.9□□□□□ -0.34
Ldb1P70662 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.9□□□□□ -0.34
Ldb1P70662 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.9□□□□□ -0.34
Ldb1P70662 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ldb1P70662 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.9□□□□□ -0.34
Ldb1P70662 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Gm8652-201ENSMUST00000181363 964 ntBASIC12.9□□□□□ -0.34
Ldb1P70662 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.9□□□□□ -0.34
Ldb1P70662 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.9□□□□□ -0.34
Ldb1P70662 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ldb1P70662 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.9□□□□□ -0.34
Ldb1P70662 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ldb1P70662 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb1P70662 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms