Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.84□□□□□ -0.67
Pdlim4P70271 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Pdlim4P70271 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Pdlim4P70271 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm6447-201ENSMUST00000118905 835 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm5035-201ENSMUST00000215581 927 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.83□□□□□ -0.68
Pdlim4P70271 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdlim4P70271 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdlim4P70271 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm4984-201ENSMUST00000115987 360 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm16202-201ENSMUST00000117532 544 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm11814-201ENSMUST00000119515 929 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm45841-201ENSMUST00000207700 164 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.82□□□□□ -0.68
Pdlim4P70271 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdlim4P70271 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms