Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.24□□□□□ -0.93
Rpl39P62892 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.24□□□□□ -0.93
Rpl39P62892 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.24□□□□□ -0.93
Rpl39P62892 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rpl39P62892 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rpl39P62892 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rpl39P62892 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rpl39P62892 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rpl39P62892 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rpl39P62892 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.24□□□□□ -0.93
Rpl39P62892 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm22065-201ENSMUST00000103753 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm22066-201ENSMUST00000103761 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24932-201ENSMUST00000103763 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24115-201ENSMUST00000103799 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm22190-201ENSMUST00000103827 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm22191-201ENSMUST00000103831 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24721-201ENSMUST00000103849 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm28018-201ENSMUST00000103869 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm26399-201ENSMUST00000103937 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm12585-201ENSMUST00000117307 290 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.23□□□□□ -0.93
Rpl39P62892 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25911-201ENSMUST00000157621 56 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25349-201ENSMUST00000177728 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm23616-201ENSMUST00000177797 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25871-201ENSMUST00000177816 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24752-201ENSMUST00000178240 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24496-201ENSMUST00000178287 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25649-201ENSMUST00000178476 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25548-201ENSMUST00000178681 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm23147-201ENSMUST00000178841 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm26095-201ENSMUST00000179270 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm22171-201ENSMUST00000179283 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm23936-201ENSMUST00000179354 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm22619-201ENSMUST00000179516 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25255-201ENSMUST00000179579 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24755-201ENSMUST00000179691 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm26506-201ENSMUST00000179692 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm25086-201ENSMUST00000179931 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm23243-201ENSMUST00000180047 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24659-201ENSMUST00000180212 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm24169-201ENSMUST00000180244 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm23689-201ENSMUST00000180354 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm27359-201ENSMUST00000184153 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm27785-201ENSMUST00000184268 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm27466-201ENSMUST00000184396 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm27703-201ENSMUST00000184836 110 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Gm18206-201ENSMUST00000207027 926 ntBASIC9.23□□□□□ -0.93
Rpl39P62892 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.23□□□□□ -0.93
Rpl39P62892 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Rpl39P62892 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rpl39P62892 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms