Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Sf3b6P59708 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3b6P59708 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm3436-201ENSMUST00000179930 840 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm27321-201ENSMUST00000185021 205 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm43703-201ENSMUST00000200523 763 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm9063-201ENSMUST00000223299 582 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm5161-201ENSMUST00000075243 853 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.53□□□□□ -0.56
Sf3b6P59708 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3b6P59708 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sf3b6P59708 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sf3b6P59708 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3b6P59708 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.52□□□□□ -0.57
Sf3b6P59708 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.52□□□□□ -0.57
Sf3b6P59708 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.52□□□□□ -0.57
Sf3b6P59708 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.52□□□□□ -0.57
Sf3b6P59708 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Sf3b6P59708 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3b6P59708 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms