Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nphp4P59240 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Nphp4P59240 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.39■□□□□ 0.37
Nphp4P59240 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nphp4P59240 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Nphp4P59240 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC17.38■□□□□ 0.37
Nphp4P59240 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.38■□□□□ 0.37
Nphp4P59240 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.38■□□□□ 0.37
Nphp4P59240 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC17.38■□□□□ 0.37
Nphp4P59240 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC17.38■□□□□ 0.37
Nphp4P59240 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.38■□□□□ 0.37
Nphp4P59240 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Nphp4P59240 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Matn2-206ENSMUST00000228570 2798 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.38■□□□□ 0.37
Nphp4P59240 Gm14644-201ENSMUST00000116671 647 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 Gm18304-201ENSMUST00000189162 546 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.38■□□□□ 0.37
Nphp4P59240 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Nphp4P59240 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nphp4P59240 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nphp4P59240 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.37■□□□□ 0.37
Nphp4P59240 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nphp4P59240 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.37■□□□□ 0.37
Nphp4P59240 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Nphp4P59240 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nphp4P59240 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Nphp4P59240 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nphp4P59240 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nphp4P59240 Gm13296-201ENSMUST00000117854 997 ntBASIC17.37■□□□□ 0.37
Nphp4P59240 Gm4909-201ENSMUST00000118749 794 ntBASIC17.37■□□□□ 0.37
Nphp4P59240 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Nphp4P59240 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Nphp4P59240 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nphp4P59240 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Gm32999-201ENSMUST00000192693 562 ntBASIC17.37■□□□□ 0.37
Nphp4P59240 Gm44651-201ENSMUST00000207343 372 ntBASIC17.37■□□□□ 0.37
Nphp4P59240 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC17.37■□□□□ 0.37
Nphp4P59240 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms