Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup43P59235 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nup43P59235 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup43P59235 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nup43P59235 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Gm11637-201ENSMUST00000120601 592 ntBASIC12.26□□□□□ -0.45
Nup43P59235 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.26□□□□□ -0.45
Nup43P59235 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.26□□□□□ -0.45
Nup43P59235 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Nup43P59235 Gm40466-201ENSMUST00000212174 422 ntBASIC12.26□□□□□ -0.45
Nup43P59235 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup43P59235 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup43P59235 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup43P59235 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.25□□□□□ -0.45
Nup43P59235 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nup43P59235 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Nup43P59235 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup43P59235 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nup43P59235 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.25□□□□□ -0.45
Nup43P59235 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.25□□□□□ -0.45
Nup43P59235 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nup43P59235 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.25□□□□□ -0.45
Nup43P59235 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup43P59235 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Nup43P59235 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.25□□□□□ -0.45
Nup43P59235 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nup43P59235 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup43P59235 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup43P59235 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup43P59235 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.24□□□□□ -0.45
Nup43P59235 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Nup43P59235 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup43P59235 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup43P59235 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms