Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn2bP55271 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn2bP55271 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn2bP55271 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn2bP55271 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn2bP55271 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn2bP55271 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Gm15371-201ENSMUST00000117057 784 ntBASIC12.41□□□□□ -0.42
Cdkn2bP55271 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.41□□□□□ -0.42
Cdkn2bP55271 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.41□□□□□ -0.42
Cdkn2bP55271 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Matn2-203ENSMUST00000226766 3252 ntBASIC12.41□□□□□ -0.42
Cdkn2bP55271 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn2bP55271 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Syt7-204ENSMUST00000223586 1344 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Gm5687-201ENSMUST00000118252 640 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Gm13813-201ENSMUST00000120998 787 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Mir6956-201ENSMUST00000183598 62 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Gm42612-201ENSMUST00000197986 623 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 Gm43170-201ENSMUST00000199827 612 ntBASIC12.4□□□□□ -0.42
Cdkn2bP55271 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn2bP55271 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Cdkn2bP55271 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdkn2bP55271 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Cdkn2bP55271 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdkn2bP55271 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms