Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.16□□□□□ -0.3
Ddx6P54823 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Gm15547-201ENSMUST00000122152 333 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Gm15276-201ENSMUST00000145953 498 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.16□□□□□ -0.3
Ddx6P54823 Gm2383-201ENSMUST00000181461 807 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.16□□□□□ -0.3
Ddx6P54823 Gm44405-201ENSMUST00000198952 126 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.16□□□□□ -0.3
Ddx6P54823 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx6P54823 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx6P54823 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ddx6P54823 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx6P54823 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Ddx6P54823 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ddx6P54823 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx6P54823 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ddx6P54823 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.15□□□□□ -0.3
Ddx6P54823 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Gm23270-201ENSMUST00000104055 131 ntBASIC13.15□□□□□ -0.3
Ddx6P54823 Gm25214-201ENSMUST00000104573 129 ntBASIC13.15□□□□□ -0.3
Ddx6P54823 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.15□□□□□ -0.3
Ddx6P54823 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.15□□□□□ -0.3
Ddx6P54823 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.15□□□□□ -0.3
Ddx6P54823 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.15□□□□□ -0.3
Ddx6P54823 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.15□□□□□ -0.3
Ddx6P54823 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.15□□□□□ -0.3
Ddx6P54823 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.15□□□□□ -0.3
Ddx6P54823 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.15□□□□□ -0.3
Ddx6P54823 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ddx6P54823 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx6P54823 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx6P54823 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.15□□□□□ -0.31
Ddx6P54823 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx6P54823 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx6P54823 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx6P54823 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms