Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.98□□□□□ -0.33
Fdft1P53798 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.98□□□□□ -0.33
Fdft1P53798 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.98□□□□□ -0.33
Fdft1P53798 Gm45668-201ENSMUST00000211271 493 ntBASIC12.98□□□□□ -0.33
Fdft1P53798 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.98□□□□□ -0.33
Fdft1P53798 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Fdft1P53798 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.98□□□□□ -0.33
Fdft1P53798 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Fdft1P53798 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fdft1P53798 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Fdft1P53798 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.97□□□□□ -0.33
Fdft1P53798 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.97□□□□□ -0.33
Fdft1P53798 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Fdft1P53798 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.97□□□□□ -0.33
Fdft1P53798 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Fdft1P53798 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fdft1P53798 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Fdft1P53798 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.96□□□□□ -0.33
Fdft1P53798 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.96□□□□□ -0.33
Fdft1P53798 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Fdft1P53798 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Fdft1P53798 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.96□□□□□ -0.33
Fdft1P53798 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms