Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.28□□□□□ -0.28
SftpbP50405 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SftpbP50405 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.28□□□□□ -0.28
SftpbP50405 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.27□□□□□ -0.28
SftpbP50405 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.27□□□□□ -0.28
SftpbP50405 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SftpbP50405 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SftpbP50405 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.27□□□□□ -0.28
SftpbP50405 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SftpbP50405 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SftpbP50405 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SftpbP50405 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SftpbP50405 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.27□□□□□ -0.28
SftpbP50405 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.27□□□□□ -0.29
SftpbP50405 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SftpbP50405 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.27□□□□□ -0.29
SftpbP50405 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 Gm38223-201ENSMUST00000194484 695 ntBASIC13.27□□□□□ -0.29
SftpbP50405 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.27□□□□□ -0.29
SftpbP50405 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.27□□□□□ -0.29
SftpbP50405 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.27□□□□□ -0.29
SftpbP50405 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.27□□□□□ -0.29
SftpbP50405 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.27□□□□□ -0.29
SftpbP50405 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SftpbP50405 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SftpbP50405 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
SftpbP50405 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.26□□□□□ -0.29
SftpbP50405 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Gm16215-201ENSMUST00000161990 637 ntBASIC13.26□□□□□ -0.29
SftpbP50405 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.26□□□□□ -0.29
SftpbP50405 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.26□□□□□ -0.29
SftpbP50405 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.26□□□□□ -0.29
SftpbP50405 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.26□□□□□ -0.29
SftpbP50405 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.26□□□□□ -0.29
SftpbP50405 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SftpbP50405 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SftpbP50405 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SftpbP50405 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SftpbP50405 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.25□□□□□ -0.29
SftpbP50405 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SftpbP50405 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.25□□□□□ -0.29
SftpbP50405 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.25□□□□□ -0.29
SftpbP50405 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.25□□□□□ -0.29
SftpbP50405 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.25□□□□□ -0.29
SftpbP50405 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.25□□□□□ -0.29
SftpbP50405 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.25□□□□□ -0.29
SftpbP50405 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SftpbP50405 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.25□□□□□ -0.29
SftpbP50405 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SftpbP50405 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SftpbP50405 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms