Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Srp9P49962 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.04□□□□□ -0.64
Srp9P49962 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.04□□□□□ -0.64
Srp9P49962 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.04□□□□□ -0.64
Srp9P49962 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Srp9P49962 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.04□□□□□ -0.64
Srp9P49962 Gm29667-201ENSMUST00000190817 490 ntBASIC11.04□□□□□ -0.64
Srp9P49962 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.04□□□□□ -0.64
Srp9P49962 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.04□□□□□ -0.64
Srp9P49962 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.04□□□□□ -0.64
Srp9P49962 Gm9797-201ENSMUST00000052902 613 ntBASIC11.04□□□□□ -0.64
Srp9P49962 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Srp9P49962 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.04□□□□□ -0.64
Srp9P49962 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.04□□□□□ -0.64
Srp9P49962 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.04□□□□□ -0.64
Srp9P49962 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.04□□□□□ -0.64
Srp9P49962 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srp9P49962 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Srp9P49962 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Srp9P49962 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.03□□□□□ -0.64
Srp9P49962 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.03□□□□□ -0.64
Srp9P49962 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.03□□□□□ -0.64
Srp9P49962 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.03□□□□□ -0.64
Srp9P49962 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm21854-201ENSMUST00000179901 471 ntBASIC11.03□□□□□ -0.64
Srp9P49962 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.03□□□□□ -0.64
Srp9P49962 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Srp9P49962 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.03□□□□□ -0.64
Srp9P49962 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.03□□□□□ -0.64
Srp9P49962 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Srp9P49962 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srp9P49962 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms