Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.41■□□□□ 0.06
Ercc3P49135 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Gm45784-201ENSMUST00000188360 142 ntBASIC15.41■□□□□ 0.06
Ercc3P49135 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Gm18062-201ENSMUST00000208020 547 ntBASIC15.41■□□□□ 0.06
Ercc3P49135 Gm18055-201ENSMUST00000208254 547 ntBASIC15.41■□□□□ 0.06
Ercc3P49135 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ercc3P49135 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.41■□□□□ 0.06
Ercc3P49135 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ercc3P49135 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.41■□□□□ 0.06
Ercc3P49135 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.41■□□□□ 0.06
Ercc3P49135 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc3P49135 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.41■□□□□ 0.06
Ercc3P49135 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ercc3P49135 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.4■□□□□ 0.06
Ercc3P49135 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ercc3P49135 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Gm23931-201ENSMUST00000103842 109 ntBASIC15.4■□□□□ 0.06
Ercc3P49135 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.4■□□□□ 0.06
Ercc3P49135 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc3P49135 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.4■□□□□ 0.06
Ercc3P49135 Gm43818-201ENSMUST00000200605 466 ntBASIC15.4■□□□□ 0.06
Ercc3P49135 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc3P49135 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc3P49135 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ercc3P49135 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ercc3P49135 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.4■□□□□ 0.06
Ercc3P49135 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc3P49135 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.4■□□□□ 0.06
Ercc3P49135 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc3P49135 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc3P49135 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.39■□□□□ 0.05
Ercc3P49135 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Ercc3P49135 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.39■□□□□ 0.05
Ercc3P49135 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ercc3P49135 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Gm12363-201ENSMUST00000122250 668 ntBASIC15.39■□□□□ 0.05
Ercc3P49135 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ercc3P49135 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ercc3P49135 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ercc3P49135 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ercc3P49135 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.39■□□□□ 0.05
Ercc3P49135 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.39■□□□□ 0.05
Ercc3P49135 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ercc3P49135 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.39■□□□□ 0.05
Ercc3P49135 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc3P49135 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms