Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.29□□□□□ -0.12
Brca1P48754 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.29□□□□□ -0.12
Brca1P48754 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.29□□□□□ -0.12
Brca1P48754 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.29□□□□□ -0.12
Brca1P48754 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Brca1P48754 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.29□□□□□ -0.12
Brca1P48754 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Brca1P48754 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Brca1P48754 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.28□□□□□ -0.12
Brca1P48754 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Brca1P48754 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.28□□□□□ -0.12
Brca1P48754 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.28□□□□□ -0.12
Brca1P48754 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.28□□□□□ -0.12
Brca1P48754 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Gm29155-201ENSMUST00000185910 269 ntBASIC14.28□□□□□ -0.12
Brca1P48754 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Brca1P48754 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
Brca1P48754 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Brca1P48754 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.28□□□□□ -0.12
Brca1P48754 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brca1P48754 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Brca1P48754 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Brca1P48754 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.27□□□□□ -0.12
Brca1P48754 Gm12899-201ENSMUST00000120565 551 ntBASIC14.27□□□□□ -0.12
Brca1P48754 Gm11246-201ENSMUST00000120880 345 ntBASIC14.27□□□□□ -0.12
Brca1P48754 Gm8199-201ENSMUST00000121323 823 ntBASIC14.27□□□□□ -0.12
Brca1P48754 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.27□□□□□ -0.12
Brca1P48754 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Brca1P48754 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.27□□□□□ -0.12
Brca1P48754 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.27□□□□□ -0.12
Brca1P48754 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.27□□□□□ -0.12
Brca1P48754 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.27□□□□□ -0.12
Brca1P48754 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Brca1P48754 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Brca1P48754 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Brca1P48754 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.27□□□□□ -0.13
Brca1P48754 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.27□□□□□ -0.13
Brca1P48754 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Brca1P48754 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Brca1P48754 Gm24934-201ENSMUST00000103764 111 ntBASIC14.27□□□□□ -0.13
Brca1P48754 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Brca1P48754 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Brca1P48754 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Gm10774-201ENSMUST00000188689 204 ntBASIC14.27□□□□□ -0.13
Brca1P48754 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Brca1P48754 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Brca1P48754 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Brca1P48754 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Brca1P48754 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brca1P48754 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.26□□□□□ -0.13
Brca1P48754 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.26□□□□□ -0.13
Brca1P48754 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Brca1P48754 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.26□□□□□ -0.13
Brca1P48754 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.26□□□□□ -0.13
Brca1P48754 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.26□□□□□ -0.13
Brca1P48754 Gm45398-201ENSMUST00000210561 165 ntBASIC14.26□□□□□ -0.13
Brca1P48754 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Brca1P48754 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brca1P48754 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms