Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps4bP46467 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Gm12341-201ENSMUST00000119724 503 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps4bP46467 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps4bP46467 Gm8602-201ENSMUST00000184045 607 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.18□□□□□ -0.3
Vps4bP46467 Itm2b-204ENSMUST00000228637 783 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Gm6180-201ENSMUST00000065243 498 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps4bP46467 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps4bP46467 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.18□□□□□ -0.3
Vps4bP46467 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps4bP46467 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4bP46467 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4bP46467 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.17□□□□□ -0.3
Vps4bP46467 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps4bP46467 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps4bP46467 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps4bP46467 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps4bP46467 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm9899-201ENSMUST00000065519 555 ntBASIC13.17□□□□□ -0.3
Vps4bP46467 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps4bP46467 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps4bP46467 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps4bP46467 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4bP46467 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.17□□□□□ -0.3
Vps4bP46467 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4bP46467 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4bP46467 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Vps4bP46467 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.16□□□□□ -0.3
Vps4bP46467 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vps4bP46467 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.16□□□□□ -0.3
Vps4bP46467 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.16□□□□□ -0.3
Vps4bP46467 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms