Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-6P43688 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.28□□□□□ -0.44
Nkx2-6P43688 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-6P43688 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm15370-201ENSMUST00000117158 253 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm26083-201ENSMUST00000157904 193 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm10608-202ENSMUST00000213924 676 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.27□□□□□ -0.45
Nkx2-6P43688 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-6P43688 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.26□□□□□ -0.45
Nkx2-6P43688 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.26□□□□□ -0.45
Nkx2-6P43688 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Gm10434-201ENSMUST00000101158 471 ntBASIC12.26□□□□□ -0.45
Nkx2-6P43688 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Gm27320-201ENSMUST00000184892 109 ntBASIC12.26□□□□□ -0.45
Nkx2-6P43688 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.26□□□□□ -0.45
Nkx2-6P43688 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Morn2-202ENSMUST00000227729 656 ntBASIC12.26□□□□□ -0.45
Nkx2-6P43688 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-6P43688 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-6P43688 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms