Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HttP42859 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.39□□□□□ -0.27
HttP42859 Gm15703-201ENSMUST00000120250 880 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm24248-201ENSMUST00000157321 322 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm18304-201ENSMUST00000189162 546 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HttP42859 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Gm22920-201ENSMUST00000102175 109 ntBASIC13.39□□□□□ -0.27
HttP42859 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.39□□□□□ -0.27
HttP42859 Gm13263-201ENSMUST00000121271 838 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HttP42859 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HttP42859 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.39□□□□□ -0.27
HttP42859 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm5805-201ENSMUST00000072779 456 ntBASIC13.39□□□□□ -0.27
HttP42859 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HttP42859 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HttP42859 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.39□□□□□ -0.27
HttP42859 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Gm15566-201ENSMUST00000121130 590 ntBASIC13.39□□□□□ -0.27
HttP42859 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Gm43186-201ENSMUST00000198130 824 ntBASIC13.39□□□□□ -0.27
HttP42859 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HttP42859 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.38□□□□□ -0.27
HttP42859 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gm11578-201ENSMUST00000118530 459 ntBASIC13.38□□□□□ -0.27
HttP42859 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.38□□□□□ -0.27
HttP42859 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.38□□□□□ -0.27
HttP42859 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HttP42859 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HttP42859 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gm5257-201ENSMUST00000121823 790 ntBASIC13.38□□□□□ -0.27
HttP42859 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
HttP42859 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.38□□□□□ -0.27
HttP42859 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.38□□□□□ -0.27
HttP42859 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.38□□□□□ -0.27
HttP42859 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.38□□□□□ -0.27
HttP42859 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.38□□□□□ -0.27
HttP42859 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gm16380-201ENSMUST00000077997 478 ntBASIC13.38□□□□□ -0.27
HttP42859 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HttP42859 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HttP42859 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Gm8343-201ENSMUST00000182705 994 ntBASIC13.37□□□□□ -0.27
HttP42859 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.37□□□□□ -0.27
HttP42859 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.37□□□□□ -0.27
HttP42859 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HttP42859 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.37□□□□□ -0.27
HttP42859 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HttP42859 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms