Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TfamP40630 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TfamP40630 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.58□□□□□ -0.4
TfamP40630 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TfamP40630 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
TfamP40630 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TfamP40630 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.57□□□□□ -0.4
TfamP40630 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.57□□□□□ -0.4
TfamP40630 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.57□□□□□ -0.4
TfamP40630 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.57□□□□□ -0.4
TfamP40630 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.57□□□□□ -0.4
TfamP40630 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.57□□□□□ -0.4
TfamP40630 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.57□□□□□ -0.4
TfamP40630 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.57□□□□□ -0.4
TfamP40630 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TfamP40630 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.57□□□□□ -0.4
TfamP40630 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TfamP40630 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TfamP40630 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.56□□□□□ -0.4
TfamP40630 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.56□□□□□ -0.4
TfamP40630 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
TfamP40630 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.56□□□□□ -0.4
TfamP40630 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TfamP40630 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms