Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1P40201 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Gm44891-201ENSMUST00000208817 2223 ntBASIC18.99■□□□□ 0.63
Chd1P40201 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC18.99■□□□□ 0.63
Chd1P40201 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
Chd1P40201 AC238811.4-201ENSMUST00000178019 1246 ntBASIC18.99■□□□□ 0.63
Chd1P40201 AC238940.3-201ENSMUST00000178830 1246 ntBASIC18.99■□□□□ 0.63
Chd1P40201 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chd1P40201 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC18.99■□□□□ 0.63
Chd1P40201 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC18.99■□□□□ 0.63
Chd1P40201 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC18.99■□□□□ 0.63
Chd1P40201 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chd1P40201 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chd1P40201 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1P40201 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.98■□□□□ 0.63
Chd1P40201 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chd1P40201 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Chd1P40201 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Chd1P40201 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chd1P40201 Gm20414-201ENSMUST00000172918 646 ntBASIC18.98■□□□□ 0.63
Chd1P40201 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC18.98■□□□□ 0.63
Chd1P40201 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC18.98■□□□□ 0.63
Chd1P40201 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chd1P40201 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.98■□□□□ 0.63
Chd1P40201 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Gm5641-201ENSMUST00000091130 1488 ntBASIC18.98■□□□□ 0.63
Chd1P40201 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1P40201 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Gm15003-201ENSMUST00000118884 446 ntBASIC18.97■□□□□ 0.63
Chd1P40201 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chd1P40201 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC18.97■□□□□ 0.63
Chd1P40201 CT009536.2-201ENSMUST00000225370 665 ntBASIC18.97■□□□□ 0.63
Chd1P40201 CT573086.4-201ENSMUST00000226729 342 ntBASIC18.97■□□□□ 0.63
Chd1P40201 Retreg1-206ENSMUST00000228306 1430 ntBASIC18.97■□□□□ 0.63
Chd1P40201 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.97■□□□□ 0.63
Chd1P40201 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.97■□□□□ 0.63
Chd1P40201 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chd1P40201 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Gm26989-201ENSMUST00000182608 749 ntBASIC18.97■□□□□ 0.63
Chd1P40201 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Chd1P40201 AC121960.1-201ENSMUST00000227982 564 ntBASIC18.97■□□□□ 0.63
Chd1P40201 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1P40201 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd1P40201 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd1P40201 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd1P40201 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd1P40201 Gm19587-201ENSMUST00000191395 545 ntBASIC18.96■□□□□ 0.63
Chd1P40201 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC18.96■□□□□ 0.63
Chd1P40201 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chd1P40201 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chd1P40201 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1P40201 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.62
Chd1P40201 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Chd1P40201 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms