Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc1P35601 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc1P35601 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc1P35601 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc1P35601 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Gm14701-201ENSMUST00000117156 348 ntBASIC13.68□□□□□ -0.22
Rfc1P35601 Gm8410-201ENSMUST00000117225 605 ntBASIC13.68□□□□□ -0.22
Rfc1P35601 Gm27622-201ENSMUST00000183779 60 ntBASIC13.68□□□□□ -0.22
Rfc1P35601 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.68□□□□□ -0.22
Rfc1P35601 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.68□□□□□ -0.22
Rfc1P35601 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rfc1P35601 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.68□□□□□ -0.22
Rfc1P35601 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc1P35601 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.67□□□□□ -0.22
Rfc1P35601 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.67□□□□□ -0.22
Rfc1P35601 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Gm25948-201ENSMUST00000175334 112 ntBASIC13.67□□□□□ -0.22
Rfc1P35601 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.67□□□□□ -0.22
Rfc1P35601 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.67□□□□□ -0.22
Rfc1P35601 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.67□□□□□ -0.22
Rfc1P35601 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.67□□□□□ -0.22
Rfc1P35601 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rfc1P35601 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc1P35601 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.66□□□□□ -0.22
Rfc1P35601 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.66□□□□□ -0.22
Rfc1P35601 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Mir1897-201ENSMUST00000122581 272 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Gm27533-201ENSMUST00000183800 152 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Shd-206ENSMUST00000225145 998 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc1P35601 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rfc1P35601 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rfc1P35601 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.66□□□□□ -0.22
Rfc1P35601 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms