Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.33□□□□□ -0.27
Nfkb1P25799 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nfkb1P25799 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nfkb1P25799 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nfkb1P25799 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.33□□□□□ -0.27
Nfkb1P25799 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Nfkb1P25799 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Nfkb1P25799 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nfkb1P25799 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nfkb1P25799 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Nfkb1P25799 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.33□□□□□ -0.28
Nfkb1P25799 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Gm44364-201ENSMUST00000198368 141 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 Gm18041-201ENSMUST00000218210 618 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 Gm5781-201ENSMUST00000219792 443 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 Gm8227-201ENSMUST00000223306 571 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nfkb1P25799 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.33□□□□□ -0.28
Nfkb1P25799 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nfkb1P25799 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm38341-201ENSMUST00000195357 515 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm45865-201ENSMUST00000211815 945 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.32□□□□□ -0.28
Nfkb1P25799 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nfkb1P25799 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nfkb1P25799 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Nfkb1P25799 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nfkb1P25799 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms