Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.83□□□□□ -0.68
Col8a2P25318 Gm10608-202ENSMUST00000213924 676 ntBASIC10.83□□□□□ -0.68
Col8a2P25318 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col8a2P25318 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Col8a2P25318 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col8a2P25318 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Col8a2P25318 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.82□□□□□ -0.68
Col8a2P25318 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.82□□□□□ -0.68
Col8a2P25318 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Gm24526-201ENSMUST00000082921 158 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col8a2P25318 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.82□□□□□ -0.68
Col8a2P25318 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col8a2P25318 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Col8a2P25318 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm11793-201ENSMUST00000120433 981 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm8738-201ENSMUST00000172606 329 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a2P25318 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.81□□□□□ -0.68
Col8a2P25318 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.81□□□□□ -0.68
Col8a2P25318 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a2P25318 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms